comp224439_c0_seq2

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Corresponding Unigene

1.03_comp224439_c0

Containing Carts

User Alias

User Description

DB Description

aspartic proteinase nepenthesin-1-like

Sequence

blastn @ NCBI

Sequence Annotation

 

Predicted Peptides

blastp @ NCBI
smartBLAST @ NCBI
Name Start End Direction Length
cds.comp224439_c0_seq2|m.1783973 2188 2376 - 63
Name Start End Direction Length
cds.comp224439_c0_seq2|m.1783971 1090 2442 + 451

Interpro Annotation

IDDescriptionStartEndeValueMatch Description
1 26 SignalP_GRAM_POSITIVE:SignalP-TM
16 23 C-terminal region of a signal peptide.
IPR021109 Aspartic peptidase domain 92 260 2.1e-35 Gene3D:G3DSA:2.40.70.10
1 23 SignalP_EUK:SignalP-noTM
95 260 7.4e-37 Xylanase inhibitor N-terminal
24 450 Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
286 442 2.6e-23 Xylanase inhibitor C-terminal
IPR001969 Aspartic peptidase, active site 319 330 Eukaryotic and viral aspartyl proteases active site.
4 15 Hydrophobic region of a signal peptide.
IPR001461 Aspartic peptidase 419 434 1.5e-07 Pepsin (A1) aspartic protease family signature
IPR001461 Aspartic peptidase 319 330 1.5e-07 Pepsin (A1) aspartic protease family signature
IPR001461 Aspartic peptidase 101 121 1.5e-07 Pepsin (A1) aspartic protease family signature
IPR021109 Aspartic peptidase domain 89 447 8.23e-84 SUPERFAMILY:SSF50630
1 3 N-terminal region of a signal peptide.
IPR001969 Aspartic peptidase, active site 110 121 Eukaryotic and viral aspartyl proteases active site.
IPR021109 Aspartic peptidase domain 276 448 3.3e-32 Gene3D:G3DSA:2.40.70.10
1 448 5.4e-100 PANTHER:PTHR13683:SF98
IPR001461 Aspartic peptidase 1 448 5.4e-100 PANTHER:PTHR13683
1 23 Signal peptide region

Gene Ontology

Biological Process
GO:0019538 protein metabolic process
GO:0044249 cellular biosynthetic process
GO:0045491 xylan metabolic process

Repeatmasker Annotation

NameClassFamilyStartEndDirectionLength
(A)n Simple_repeat 1 20 + 20
AT_rich Low_complexity 3002 3044 + 43

Expression Analysis

Experiment
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Differential Expression Analysis

Experiment
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Import information

Imported into TBro2015-10-18 15:44:48.858971
Release1.03
OrganismVenus Flytrap

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